Overview Annotation GWAS Evidence Associated genes

P22562

Metabolite ID
P22562
Deionized mass
308.1072 Da
Average m/z
309.1140
Average RT
13.8945
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
29
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

29 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)4.743e-11
Glyma.16G137000 hypothetical protein NA 2Chr16:29418205–29421765 (-)1.493e-11
Glyma.16G137100 hypothetical protein NA 2Chr16:29421091–29421534 (+)1.493e-11
Glyma.16G137600 hypothetical protein NA 2Chr16:29468438–29472890 (-)3.636e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)3.067e-13
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)4.037e-11
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)3.702e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)5.739e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)5.575e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)5.575e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.122e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)6.2e-13
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)4.658e-12
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)4.658e-12
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)4.5e-13
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.883e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)4.743e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.789e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)1.789e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)1.789e-11
Glyma.15G049000 hypothetical protein NA 1Chr15:3866108–3867740 (+)6.254e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.127e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.649e-13
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)1.107e-15
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)3.301e-12
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)1.96e-12
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)6.737e-12
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)4.358e-11
Glyma.18G072800 hypothetical protein AT1G55760:AT1G55760:BTB/POZ domain-containing protein 1Chr18:6873417–6878947 (-)6.73e-11