Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P22465

Metabolite ID
P22465
Deionized mass
1192.3390 Da
Average m/z
1193.3376
Average RT
13.8677
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
44
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

44 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 3Chr18:47102746–47129707 (+)2.955e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)3.423e-13
Glyma.11G145000 hypothetical protein AT4G27490:RRP41L:3'-5'-exoribonuclease family protein 2Chr11:11117760–11123162 (+)5.048e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)2.052e-11
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)7.102e-11
Glyma.01G022300 hypothetical protein NA 1Chr01:2215383–2217438 (+)1.119e-11
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)2.269e-12
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)8.169e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)7.218e-11
Glyma.05G057800 hypothetical protein NA 1Chr05:5350390–5361850 (-)5.271e-11
Glyma.05G057900 hypothetical protein NA 1Chr05:5351475–5352261 (+)5.271e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)5.039e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.876e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)5.864e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)5.864e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)3.8e-11
Glyma.06G145300 hypothetical protein AT5G05340:PRX52:Peroxidase superfamily protein 1Chr06:11849535–11851671 (+)6.627e-11
Glyma.06G147600 BRI1A brassinosteroid receptor AT4G39400:BRI1:Leucine-rich receptor-like protein kinase family protein 1Chr06:12052122–12056526 (-)5.365e-12
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 1Chr07:6270176–6283087 (-)7.232e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.643e-11
Glyma.11G000700 hypothetical protein AT4G34150:AT4G34150:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr11:33497–35198 (+)1.308e-11
Glyma.11G144800 hypothetical protein AT2G28250:NCRK:Protein kinase superfamily protein 1Chr11:11096950–11105343 (+)5.048e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)9.164e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)9.164e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)9.164e-12
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)2.97e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.565e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)2.052e-11
Glyma.14G179000 hypothetical protein AT1G12680:PEPKR2:phosphoenolpyruvate carboxylase-related kinase 2 1Chr14:44030814–44034325 (+)1.525e-11
Glyma.14G179200 hypothetical protein AT4G24380:AT4G24380:dihydrofolate reductase 1Chr14:44060802–44063722 (+)1.525e-11
Glyma.14G179900 hypothetical protein NA 1Chr14:44227886–44232217 (-)6.885e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)5.745e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.025e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)5.745e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)5.745e-12
Glyma.15G257800 hypothetical protein NA 1Chr15:48777878–48788726 (-)1.59e-11
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 1Chr17:36142245–36146771 (-)3.072e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)7.103e-11
Glyma.18G194900 hypothetical protein NA 1Chr18:46855096–46855729 (+)4.113e-12
Glyma.18G197500 hypothetical protein NA 1Chr18:47377826–47380850 (+)1.966e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)6.947e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)1.849e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)5.952e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)1.379e-11