Overview Annotation GWAS Evidence Associated genes

P22452

Metabolite ID
P22452
Deionized mass
416.2382 Da
Average m/z
417.2442
Average RT
13.8644
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
23
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

23 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 4Chr03:169480–172727 (+)1.242e-12
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)7.626e-11
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)1.025e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)8.955e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)7.626e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)3.615e-11
Glyma.03G001400 hypothetical protein AT2G38610:AT2G38610:RNA-binding KH domain-containing protein 1Chr03:160599–165525 (+)4.093e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)8.016e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)3.889e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)3.889e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)8.955e-12
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)3.65e-12
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)3.65e-12
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)1.175e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)1.025e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)1.025e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)1.025e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)1.025e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)6.52e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.327e-13
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.448e-14
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)1.226e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)9.015e-11