Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P22213

Metabolite ID
P22213
Deionized mass
957.2901 Da
Average m/z
958.3008
Average RT
13.7998
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
66
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

66 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)6.638e-12
Glyma.06G301000 hypothetical protein NA 2Chr06:49001317–49005605 (+)2.27e-14
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)2.699e-13
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)1.194e-17
Glyma.16G203300 hypothetical protein AT5G62230:ERL1:ERECTA-like 1 2Chr16:36437330–36445131 (+)3.473e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)2.109e-11
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)1.503e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.306e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)5.636e-13
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)5.049e-13
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)8.703e-13
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)2.332e-11
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)3.478e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)3.66e-13
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)5.397e-13
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)5.397e-13
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)8.721e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.708e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.708e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.708e-12
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)1.886e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.097e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.097e-12
Glyma.06G209300 hypothetical protein NA 1Chr06:20573671–20581076 (-)2.698e-11
Glyma.06G301100 hypothetical protein AT2G16030:AT2G16030:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr06:49013527–49014231 (+)1.833e-12
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)1.117e-12
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)1.494e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)6.386e-13
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.045e-14
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)6.906e-13
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)2.042e-12
Glyma.08G115400 hypothetical protein NA 1Chr08:8848959–8851344 (+)2.941e-11
Glyma.08G115700 hypothetical protein AT1G29120:AT1G29120:Hydrolase-like protein family 1Chr08:8868075–8876513 (+)5.131e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.602e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.952e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)4.107e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)4.107e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.107e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)4.107e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.475e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.197e-12
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)2.921e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)4.623e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)4.623e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)4.219e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.782e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.194e-17
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)4.713e-15
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)4.47e-13
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)6.638e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)8.161e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)8.773e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)8.89e-12
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)8.237e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)3.401e-12
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)7.444e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.36e-11
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)5.462e-11
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)8.417e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)5.476e-11
Glyma.16G143400 hypothetical protein NA 1Chr16:30337469–30338390 (-)2.845e-13
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)1.18e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)6.734e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)9.885e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)9.886e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.608e-12