Overview Annotation GWAS Evidence Associated genes

P22172

Metabolite ID
P22172
Deionized mass
593.9022 Da
Average m/z
594.9029
Average RT
13.7895
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
146
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

146 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)2.564e-11
Glyma.06G201700 hypothetical protein NA 3Chr06:18577883–18617874 (+)1.043e-12
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)4.079e-14
Glyma.08G226000 hypothetical protein AT3G13062:AT3G13062:Polyketide cyclase/dehydrase and lipid transport superfamily protein 3Chr08:18321377–18335864 (-)4.841e-15
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)2.911e-12
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)2.013e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)3.345e-13
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)7.357e-14
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)2.773e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.898e-18
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)4.219e-11
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)7.58e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)2.564e-11
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)9.42e-11
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)3.167e-13
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.597e-15
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)2.219e-13
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)9.044e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)7.202e-14
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)3.053e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.023e-15
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)2.371e-11
Glyma.04G014300 hypothetical protein AT1G20880:AT1G20880:RNA-binding (RRM/RBD/RNP motifs) family protein 1Chr04:1101709–1106543 (+)3.948e-11
Glyma.04G014600 hypothetical protein NA 1Chr04:1119108–1123175 (+)3.948e-11
Glyma.04G015500 hypothetical protein AT2G33670:MLO5:Seven transmembrane MLO family protein 1Chr04:1176657–1181234 (-)2.695e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)3.851e-14
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)3.646e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)8.321e-12
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)2.255e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.164e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)2.727e-13
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.289e-13
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.289e-13
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)8.853e-15
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.319e-14
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.319e-14
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.319e-14
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)3.373e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.058e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.842e-12
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)7.249e-11
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)7.249e-11
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)7.249e-11
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)7.249e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.535e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.022e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)8.561e-14
Glyma.06G185400 hypothetical protein AT5G65200:PUB38:plant U-box 38 1Chr06:16108185–16111175 (-)6.531e-12
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)2.628e-12
Glyma.06G202000 hypothetical protein AT5G07940:AT5G07940:dentin sialophosphoprotein-like protein 1Chr06:18655235–18667810 (-)3.413e-11
Glyma.06G203300 hypothetical protein AT1G18640:PSP:3-phosphoserine phosphatase 1Chr06:19025714–19030363 (+)2.451e-12
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)3.75e-12
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)3.75e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)4.079e-14
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)4.079e-14
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)3.345e-13
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)3.345e-13
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)3.345e-13
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)3.345e-13
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)1.637e-13
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)1.637e-13
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)1.314e-16
Glyma.08G226100 hypothetical protein AT3G13060:ECT5:evolutionarily conserved C-terminal region 5 1Chr08:18339384–18347070 (-)4.841e-15
Glyma.08G226400 hypothetical protein AT3G13050:NiaP:Major facilitator superfamily protein 1Chr08:18370226–18374060 (-)4.841e-15
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)6.887e-13
Glyma.09G052900 hypothetical protein NA 1Chr09:4652312–4653046 (+)3.73e-11
Glyma.09G054100 hypothetical protein NA 1Chr09:4780506–4788669 (-)3.73e-11
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)1.845e-13
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)3.809e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.132e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)7.494e-12
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)2.091e-13
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)2.784e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.73e-13
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.73e-13
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.73e-13
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.73e-13
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)5.789e-14
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.687e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)5.934e-13
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)2.643e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)8.944e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)8.944e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)8.944e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)8.944e-11
Glyma.11G062400 hypothetical protein AT4G36860:AT4G36860:LIM domain-containing protein 1Chr11:4720040–4726569 (+)3.817e-11
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)4.523e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)1.532e-12
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)1.532e-12
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)1.532e-12
Glyma.11G240600 hypothetical protein NA 1Chr11:33491895–33493311 (+)3.665e-11
Glyma.11G241000 hypothetical protein AT4G39960:AT4G39960:Molecular chaperone Hsp40/DnaJ family protein 1Chr11:33526493–33531210 (+)2.744e-12
Glyma.11G241300 hypothetical protein AT4G39990:RABA4B:RAB GTPase homolog A4B 1Chr11:33552339–33555298 (+)7.233e-11
Glyma.11G241400 hypothetical protein AT4G40000:AT4G40000:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr11:33556332–33563163 (-)2.116e-11
Glyma.11G241900 hypothetical protein NA 1Chr11:33589346–33594428 (-)2.116e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)4.101e-12
Glyma.12G193800 hypothetical protein AT2G05710:ACO3:aconitase 3 1Chr12:35551596–35559129 (+)1.515e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.218e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.218e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.773e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)2.693e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)1.396e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)3.138e-15
Glyma.13G156200 hypothetical protein AT1G80710:DRS1:DROUGHT SENSITIVE 1 1Chr13:27115515–27118951 (+)7.553e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)7.036e-12
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)2.703e-12
Glyma.13G199800 hypothetical protein NA 1Chr13:31353786–31356378 (+)7.68e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)2.773e-14
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)2.773e-14
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)2.773e-14
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)5.817e-15
Glyma.13G204200 hypothetical protein NA 1Chr13:31822330–31826011 (+)2.121e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)2.927e-14
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)4.219e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)2.958e-11
Glyma.15G047100 hypothetical protein AT1G71240:AT1G71240:chromosome-partitioning protein, putative (DUF639) 1Chr15:3736217–3746037 (+)5.502e-11
Glyma.15G047800 hypothetical protein AT1G33270:AT1G33270:Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein 1Chr15:3777567–3783739 (+)5.502e-11
Glyma.15G048200 hypothetical protein AT1G25260:AT1G25260:Ribosomal protein L10 family protein 1Chr15:3812816–3815263 (+)3.535e-11
Glyma.15G049000 hypothetical protein NA 1Chr15:3866108–3867740 (+)2.918e-11
Glyma.15G049800 hypothetical protein NA 1Chr15:3927843–3933656 (-)5.039e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.607e-14
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)8.367e-11
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)6.454e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.173e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.433e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)7.823e-12
Glyma.16G134500 hypothetical protein NA 1Chr16:29128092–29130458 (-)9.296e-11
Glyma.16G138400 hypothetical protein NA 1Chr16:29560913–29562163 (+)3.353e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.567e-13
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)9.38e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)4.185e-12
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)2.352e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)2.013e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)2.066e-13
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)2.066e-13
Glyma.18G006800 hypothetical protein AT1G67370:ASY1:DNA-binding HORMA family protein 1Chr18:495989–502111 (-)1.406e-11
Glyma.18G057500 hypothetical protein AT2G30170:PBCP:Protein phosphatase 2C family protein 1Chr18:5080060–5083756 (-)6.706e-11
Glyma.18G057600 hypothetical protein AT1G07020:AT1G07020:uncharacterized protein 1Chr18:5084210–5084791 (+)6.706e-11
Glyma.18G057900 hypothetical protein NA 1Chr18:5092695–5097651 (-)6.706e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)1.838e-11
Glyma.18G213500 hypothetical protein AT2G38550:AT2G38550:Transmembrane proteins 14C 1Chr18:50044567–50050213 (-)8.116e-14
Glyma.18G213700 hypothetical protein NA 1Chr18:50068173–50075808 (-)1.973e-13
Glyma.18G236700 hypothetical protein AT3G61490:AT3G61490:Pectin lyase-like superfamily protein 1Chr18:52558809–52562720 (+)1.47e-12
Glyma.18G238000 hypothetical protein AT1G01490:AT1G01490:Heavy metal transport/detoxification superfamily protein 1Chr18:52679724–52682816 (+)5.891e-15
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)7.49e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)7.49e-11