Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P22169

Metabolite ID
P22169
Deionized mass
859.3570 Da
Average m/z
860.3627
Average RT
13.7891
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
41
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

41 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G123500 hypothetical protein NA 3Chr08:9494946–9505931 (-)3.866e-12
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)7.44e-14
Glyma.08G122200 hypothetical protein NA 2Chr08:9416766–9429995 (-)3.866e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.795e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.795e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.667e-11
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)7.192e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)6.853e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)6.853e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.102e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.633e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.179e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)3.866e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)3.866e-12
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)9.049e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)3.866e-12
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)2.511e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)2.511e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)1.717e-11
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)4.496e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)8.373e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)8.373e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)8.373e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)8.373e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)3.711e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.891e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)2.95e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)2.95e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)2.95e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.486e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.486e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.795e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.795e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.68e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.667e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)7.192e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.096e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.096e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)7.702e-11
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)3.046e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)2.644e-13