Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P22012

Metabolite ID
P22012
Deionized mass
362.1696 Da
Average m/z
363.1767
Average RT
13.7496
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G201700 hypothetical protein NA 3Chr06:18577883–18617874 (+)5.602e-13
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)5.025e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)2.169e-15
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2Chr12:36289704–36295084 (-)1.499e-15
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.515e-13
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)1.626e-14
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.165e-15
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)4.86e-11
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)1.98e-14
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)1.413e-12
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)2.465e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.52e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)8.008e-11
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)6.027e-11
Glyma.06G200200 hypothetical protein NA 1Chr06:18327920–18331068 (-)5.115e-11
Glyma.06G202000 hypothetical protein AT5G07940:AT5G07940:dentin sialophosphoprotein-like protein 1Chr06:18655235–18667810 (-)2.773e-12
Glyma.06G202200 hypothetical protein AT1G74310:HSP101:heat shock protein 101 1Chr06:18712866–18716868 (+)8.54e-13
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)5.025e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)5.025e-11
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)7.643e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)6.462e-11
Glyma.08G199700 hypothetical protein AT5G50340:AT5G50340:DNA repair protein RadA-like protein 1Chr08:16130591–16137703 (+)7.779e-12
Glyma.08G199800 hypothetical protein NA 1Chr08:16137933–16142956 (-)7.779e-12
Glyma.08G199900 hypothetical protein AT3G16480:MPPalpha:mitochondrial processing peptidase alpha subunit 1Chr08:16146033–16151741 (+)7.779e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.072e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)9.044e-13
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)1.226e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.169e-15
Glyma.12G202700 hypothetical protein AT2G20875:EPF1:epidermal patterning factor 1 1Chr12:36329374–36330905 (-)2.113e-14
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.156e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.626e-14
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)5.789e-13
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)5.091e-16
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)6.595e-11
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)2.507e-11
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)2.507e-11
Glyma.15G107500 hypothetical protein NA 1Chr15:8435042–8443925 (+)2.967e-11
Glyma.15G107800 hypothetical protein AT1G64570:DUO3:Homeodomain-like superfamily protein 1Chr15:8473049–8483746 (+)9.245e-11
Glyma.15G108100 hypothetical protein NA 1Chr15:8500878–8505582 (-)8.442e-13
Glyma.15G108400 hypothetical protein AT1G11840:GLX1:glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 1Chr15:8534420–8539477 (-)5.9e-12
Glyma.15G108500 hypothetical protein NA 1Chr15:8535758–8538465 (+)5.9e-12
Glyma.15G111900 hypothetical protein NA 1Chr15:8769366–8777275 (-)1.559e-12
Glyma.15G112100 hypothetical protein AT4G04180:AT4G04180:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr15:8796403–8805644 (-)1.559e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.061e-12
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)5.332e-11
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 1Chr17:10870710–10872285 (+)6.612e-12
Glyma.17G214600 hypothetical protein NA 1Chr17:36049053–36054871 (-)8.692e-13