Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P21955

Metabolite ID
P21955
Deionized mass
463.1155 Da
Average m/z
464.1256
Average RT
13.7395
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
49
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

49 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.064e-13
Glyma.01G045600 hypothetical protein NA 2Chr01:5242432–5245038 (-)1.805e-11
Glyma.01G174100 hypothetical protein NA 2Chr01:51102207–51104922 (+)4.445e-11
Glyma.05G149900 hypothetical protein NA 2Chr05:34389242–34393621 (-)1.719e-11
Glyma.08G116400 hypothetical protein NA 2Chr08:8947598–8949573 (-)1.447e-13
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)9.881e-12
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 2Chr09:46835469–46838091 (-)3.217e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.017e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.017e-13
Glyma.16G139000 hypothetical protein NA 2Chr16:29623540–29631451 (+)4.045e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 2Chr16:35831912–35835153 (+)3.089e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.064e-13
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)1.805e-11
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)4.445e-11
Glyma.01G174300 hypothetical protein NA 1Chr01:51115502–51120201 (+)5.365e-13
Glyma.01G174600 hypothetical protein AT5G66740:AT5G66740:spindle assembly abnormal protein (DUF620) 1Chr01:51138854–51141103 (+)5.365e-13
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)3.929e-11
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)5.199e-11
Glyma.06G319700 hypothetical protein AT1G33590:AT1G33590:Leucine-rich repeat (LRR) family protein 1Chr06:50856253–50858320 (+)3.464e-11
Glyma.06G320100 hypothetical protein AT5G56290:PEX5:peroxin 5 1Chr06:50874167–50888925 (-)3.464e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)4.422e-11
Glyma.08G116300 P34 NA 1Chr08:8935918–8938248 (-)3.894e-12
Glyma.08G116700 hypothetical protein NA 1Chr08:8997512–9003565 (+)1.345e-12
Glyma.08G116800 hypothetical protein AT1G29240:AT1G29240:transcription initiation factor TFIID subunit, putative (DUF688) 1Chr08:9006479–9010442 (-)5.649e-12
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)9.881e-12
Glyma.08G118600 hypothetical protein AT1G29300:UNE1:intracellular protein transporter, putative (DUF641) 1Chr08:9169843–9172229 (-)3.15e-11
Glyma.08G180900 hypothetical protein AT5G64570:XYL4:beta-D-xylosidase 4__AT5G09730:BXL3:beta-xylosidase 3 1Chr08:14516542–14521137 (+)1.67e-12
Glyma.08G181500 hypothetical protein AT4G25980:AT4G25980:peroxidase superfamily protein 1Chr08:14566842–14570376 (-)1.039e-11
Glyma.08G182000 hypothetical protein NA 1Chr08:14601875–14604750 (+)4.79e-11
Glyma.09G011700 hypothetical protein NA 1Chr09:894858–897607 (-)2.814e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)9.879e-13
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)4.106e-14
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)4.259e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)2.656e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.113e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.017e-13
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.017e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.351e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)4.784e-12
Glyma.16G138500 hypothetical protein NA 1Chr16:29564872–29566190 (+)1.454e-14
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)5.496e-17
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)1.822e-11
Glyma.18G213900 hypothetical protein AT3G08740:AT3G08740:elongation factor P (EF-P) family protein 1Chr18:50082939–50086770 (-)2.357e-12
Glyma.18G214000 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr18:50088148–50092969 (-)1.304e-13
Glyma.18G227400 hypothetical protein AT2G45720:AT2G45720:ARM repeat superfamily protein 1Chr18:51650951–51654636 (-)3.667e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)5.734e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.995e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.995e-12
Glyma.20G101700 hypothetical protein AT5G08580:AT5G08580:Calcium-binding EF hand family protein 1Chr20:34467936–34475476 (-)3.842e-12