Overview Annotation GWAS Evidence Associated genes

P21906

Metabolite ID
P21906
Deionized mass
548.1028 Da
Average m/z
549.1111
Average RT
13.7280
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
39
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

39 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 3Chr16:36806718–36809299 (+)1.549e-15
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.855e-11
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)4.995e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)6.075e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.15e-14
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)5.795e-12
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)5.795e-12
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)4.659e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.483e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)6.026e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)6.724e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)4.692e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.586e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)8.649e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)2.549e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)2.549e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)2.549e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)2.549e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)2.505e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)2.505e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.103e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.103e-11
Glyma.13G162300 hypothetical protein NA 1Chr13:27773991–27778719 (-)4.229e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)2.375e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.102e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.855e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)3.422e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.422e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)1.073e-11
Glyma.16G208400 hypothetical protein NA 1Chr16:36789890–36801967 (-)2.794e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.869e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.869e-12
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr19:41018746–41025024 (+)2.391e-11
Glyma.19G188200 hypothetical protein NA 1Chr19:44647446–44649620 (-)7.227e-11
Glyma.19G216500 hypothetical protein AT3G62390:TBL6:TRICHOME BIREFRINGENCE-LIKE 6 1Chr19:46951591–46954520 (+)8.156e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)2.404e-13
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)1.891e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)2.693e-12
Glyma.20G152300 hypothetical protein NA 1Chr20:39117272–39119456 (+)3.49e-11