Overview Annotation GWAS Evidence Associated genes

P21875

Metabolite ID
P21875
Deionized mass
1128.3839 Da
Average m/z
1129.3928
Average RT
13.7184
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.624e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)8.203e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.934e-11
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)2.934e-11
Glyma.08G123500 hypothetical protein NA 1Chr08:9494946–9505931 (-)4.587e-12
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)4.268e-13
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)4.507e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)1.942e-11
Glyma.18G299700 hypothetical protein AT2G43180:AT2G43180:Phosphoenolpyruvate carboxylase family protein 1Chr18:57755837–57757150 (-)3.51e-11