Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P21815

Metabolite ID
P21815
Deionized mass
525.2125 Da
Average m/z
526.2204
Average RT
13.6950
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
97
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

97 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)2.522e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)3.088e-14
Glyma.01G018000 hypothetical protein NA 2Chr01:1736217–1737749 (-)2.658e-15
Glyma.06G206000 hypothetical protein AT5G08110:AT5G08110:UBQ, helicase-c and DEAD-like helicase domain-containing protein 2Chr06:19693187–19711341 (-)6.292e-11
Glyma.06G209300 hypothetical protein NA 2Chr06:20573671–20581076 (-)6.51e-13
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2Chr12:36289704–36295084 (-)8.43e-14
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.932e-14
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)6.049e-16
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.349e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.349e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.672e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)2.522e-11
Glyma.20G120200 hypothetical protein NA 2Chr20:36268998–36282456 (-)3.111e-13
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)7.488e-11
Glyma.02G116900 hypothetical protein NA 1Chr02:11394318–11395331 (-)1.09e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)7.337e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)2.645e-12
Glyma.03G148900 hypothetical protein NA 1Chr03:36449311–36451278 (+)9.911e-11
Glyma.03G149000 hypothetical protein AT2G48010:RKF3:receptor-like kinase in in flowers 3 1Chr03:36454104–36456822 (+)5.355e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)3.812e-14
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 1Chr04:7187985–7192897 (+)4.038e-11
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)2.816e-11
Glyma.05G206200 hypothetical protein AT1G63410:AT1G63410:LURP-one-like protein (DUF567) 1Chr05:38904753–38908922 (-)7.162e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.675e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.613e-12
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)6.101e-14
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.359e-16
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.901e-16
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.27e-13
Glyma.06G085900 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr06:6617102–6622706 (-)4.147e-12
Glyma.06G202200 hypothetical protein AT1G74310:HSP101:heat shock protein 101 1Chr06:18712866–18716868 (+)3.366e-12
Glyma.06G204600 hypothetical protein NA 1Chr06:19307068–19316071 (-)4.244e-11
Glyma.06G204800 hypothetical protein AT1G18610:AT1G18610:Galactose oxidase/kelch repeat superfamily protein 1Chr06:19324767–19334540 (-)7.483e-11
Glyma.06G204900 hypothetical protein AT1G74120:AT1G74120:Mitochondrial transcription termination factor family protein 1Chr06:19353866–19354929 (+)7.483e-11
Glyma.06G205800 AP1A agamous-like MADS-box AT5G60910:AGL8:AGAMOUS-like 8 1Chr06:19583729–19590906 (+)6.292e-11
Glyma.06G207900 hypothetical protein NA 1Chr06:20278974–20282107 (-)4.614e-12
Glyma.06G208000 hypothetical protein AT1G74000:SS3:strictosidine synthase 3 1Chr06:20286288–20288769 (+)4.614e-12
Glyma.06G208900 hypothetical protein NA 1Chr06:20515068–20521900 (-)4.614e-12
Glyma.06G209400 hypothetical protein NA 1Chr06:20622369–20629712 (+)4.614e-12
Glyma.06G209600 hypothetical protein AT1G48960:AT1G48960:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:20638577–20641470 (+)4.614e-12
Glyma.06G210000 hypothetical protein NA 1Chr06:20706632–20708144 (-)4.614e-12
Glyma.06G210100 hypothetical protein NA 1Chr06:20725481–20728890 (-)4.614e-12
Glyma.06G210400 hypothetical protein AT1G03280:AT1G03280:Transcription factor TFIIE, alpha subunit 1Chr06:20768340–20778709 (-)4.614e-12
Glyma.06G210900 hypothetical protein AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein 1Chr06:20942818–20945744 (+)4.614e-12
Glyma.06G211500 hypothetical protein AT5G19950:AT5G19950:tudor domain protein (DUF1767) 1Chr06:21104409–21114116 (-)4.614e-12
Glyma.06G211700 hypothetical protein NA 1Chr06:21226061–21226529 (-)2.113e-11
Glyma.06G211800 hypothetical protein NA 1Chr06:21237649–21239875 (+)2.113e-11
Glyma.06G213600 hypothetical protein NA 1Chr06:21713618–21726865 (+)2.113e-11
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)2.048e-14
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)1.948e-13
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)1.642e-13
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)1.948e-13
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)1.948e-13
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)1.642e-13
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)3.004e-12
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)2.614e-12
Glyma.07G033500 hypothetical protein NA 1Chr07:2619614–2627010 (+)3.448e-11
Glyma.07G033700 hypothetical protein AT1G52820:AT1G52820:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 1Chr07:2636344–2637789 (+)2.363e-11
Glyma.07G034300 hypothetical protein NA 1Chr07:2701469–2717662 (-)6.45e-13
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)1.842e-11
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)1.842e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)8.341e-13
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)8.466e-12
Glyma.08G115400 hypothetical protein NA 1Chr08:8848959–8851344 (+)1.157e-12
Glyma.08G115700 hypothetical protein AT1G29120:AT1G29120:Hydrolase-like protein family 1Chr08:8868075–8876513 (+)3.232e-13
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)2.614e-11
Glyma.08G127000 hypothetical protein NA 1Chr08:9781692–9785219 (+)2.17e-12
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)5.696e-17
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)9.603e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.636e-13
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)4.99e-13
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)4.99e-13
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)4.99e-13
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)4.99e-13
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)7.045e-13
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)3.015e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)3.015e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)6.639e-11
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)9.716e-11
Glyma.12G198700 hypothetical protein AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr12:36001658–36004086 (+)4.005e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.565e-15
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.565e-15
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)8.196e-16
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)6.049e-16
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)5.43e-13
Glyma.13G053000 hypothetical protein AT3G02230:RGP1:reversibly glycosylated polypeptide 1 1Chr13:15046821–15050021 (+)1.147e-13
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 1Chr13:24677399–24693129 (-)3.178e-11
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)3.178e-11
Glyma.13G135100 hypothetical protein AT5G02750:SGR9:RING/U-box superfamily protein 1Chr13:24744740–24746437 (+)1.758e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.349e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.349e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.613e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)6.859e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.474e-12
Glyma.16G205600 hypothetical protein AT4G10280:AT4G10280:RmlC-like cupins superfamily protein__AT4G10290:AT4G10290:RmlC-like cupins superfamily protein 1Chr16:36633000–36634978 (+)3.534e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)4.433e-12
Glyma.20G179600 hypothetical protein AT2G39220:PLP6:PATATIN-like protein 6__AT3G54950:pPLAIIIbeta:patatin-like protein 6 1Chr20:41714740–41719977 (-)6.481e-12