Overview Annotation GWAS Evidence Associated genes

P21789

Metabolite ID
P21789
Deionized mass
309.1112 Da
Average m/z
310.1180
Average RT
13.6872
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)1.589e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)9.941e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)8.005e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)2.309e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)8.836e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.222e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.21e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.222e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.222e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.297e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)1.589e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)1.589e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)9.128e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)4.176e-14
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 1Chr17:10870710–10872285 (+)1.011e-12