Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P21565

Metabolite ID
P21565
Deionized mass
225.1386 Da
Average m/z
226.1446
Average RT
13.6048
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
51
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

51 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)7.708e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.176e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.176e-12
Glyma.16G189500 hypothetical protein NA 2Chr16:35202920–35206459 (-)5.001e-11
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)5.163e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)7.571e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.722e-16
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.093e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)2.172e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.398e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.21e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.761e-14
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.761e-14
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)4.453e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)8.374e-11
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)9.884e-11
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)9.884e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)3.7e-11
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)5.867e-11
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)5.867e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.767e-11
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)1.767e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)5.275e-13
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.13e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.13e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.13e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.13e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)5.687e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.205e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.436e-14
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.436e-14
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)9.767e-13
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.145e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)3.445e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)8.279e-13
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)8.279e-13
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.939e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.939e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.176e-12
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)5.552e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)5.552e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)8.429e-11
Glyma.16G189400 hypothetical protein NA 1Chr16:35199461–35202266 (+)5.001e-11
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)6.018e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)5.163e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)9.981e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)5.39e-12
Glyma.18G299700 hypothetical protein AT2G43180:AT2G43180:Phosphoenolpyruvate carboxylase family protein 1Chr18:57755837–57757150 (-)8.951e-11
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)9.718e-11
Glyma.20G105300 hypothetical protein AT4G38470:STY46:ACT-like protein tyrosine kinase family protein 1Chr20:34757381–34771672 (+)3.008e-12
Glyma.20G105900 hypothetical protein AT2G16990:AT2G16990:Major facilitator superfamily protein 1Chr20:34832271–34839955 (-)1.206e-11