Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P21320

Metabolite ID
P21320
Deionized mass
234.0757 Da
Average m/z
235.0808
Average RT
13.5387
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
49
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

49 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)2.474e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)3.908e-17
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)3.505e-14
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 2Chr06:50401945–50408153 (+)1.573e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)8.654e-14
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)7.717e-14
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.738e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.738e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)2.474e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)8.523e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)1.709e-11
Glyma.03G035400 hypothetical protein AT3G42630:AT3G42630:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:4282985–4285957 (-)1.627e-11
Glyma.03G035500 hypothetical protein NA 1Chr03:4289118–4294184 (+)4.586e-11
Glyma.03G036600 hypothetical protein NA 1Chr03:4432910–4435002 (-)2.791e-11
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)3.894e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)3.071e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)7.413e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)1.491e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.527e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.628e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.104e-12
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)4.26e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)4.26e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)3.585e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)9.482e-13
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)8.191e-11
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)1.652e-14
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)2.739e-11
Glyma.12G003500 hypothetical protein AT5G61670:AT5G61670:orange protein 1Chr12:285588–289372 (-)2.879e-12
Glyma.12G003900 hypothetical protein AT5G51550:EXL3:EXORDIUM like 3 1Chr12:302437–304546 (+)7.747e-12
Glyma.12G098000 hypothetical protein NA 1Chr12:8432078–8439545 (+)1.904e-11
Glyma.12G098300 hypothetical protein NA 1Chr12:8458112–8459817 (+)1.904e-11
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)3.656e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)6.94e-11
Glyma.12G203300 hypothetical protein AT4G03430:EMB2770:pre-mRNA splicing factor-like protein 1Chr12:36371465–36377700 (-)3.403e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.708e-14
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)7.717e-14
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)8.286e-12
Glyma.13G094800 hypothetical protein AT5G57580:AT5G57580:Calmodulin-binding protein 1Chr13:20995143–21001535 (+)7.383e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)1.407e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)3.505e-14
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)2.796e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.288e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.288e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.738e-13
Glyma.14G194100 hypothetical protein AT5G58620:AT5G58620:zinc finger (CCCH-type) family protein 1Chr14:45920719–45923885 (+)2.079e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)5.456e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)1.459e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)1.406e-11