Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P21295

Metabolite ID
P21295
Deionized mass
261.1001 Da
Average m/z
262.1080
Average RT
13.5300
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
52
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

52 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)3.114e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)2.151e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.463e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)5.434e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)5.434e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)3.046e-11
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)1.675e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.747e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.747e-13
Glyma.02G115900 hypothetical protein AT1G26480:GRF12:ral regulatory factor 12 1Chr02:11280858–11285984 (+)1.107e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.375e-17
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)7.434e-11
Glyma.04G190700 hypothetical protein NA 1Chr04:46143583–46146881 (+)9.432e-11
Glyma.04G190800 hypothetical protein AT5G07460:PMSR2:peptidemethionine sulfoxide reductase 2 1Chr04:46143080–46147709 (-)9.432e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)4.581e-12
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)4.136e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)4.632e-14
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)4.143e-18
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)5.85e-17
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)2.026e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.528e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)2.868e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.463e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.463e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.463e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.463e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)9.976e-13
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)5.9e-12
Glyma.11G110300 hypothetical protein AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… 1Chr11:8402144–8406496 (-)2.3e-15
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.978e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.978e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)7.488e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)7.444e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)7.443e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.434e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.062e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)3.046e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.576e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)3.739e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)9.798e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)5.311e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.132e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.892e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)5.905e-14
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)5.905e-14
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)1.661e-14
Glyma.17G214600 hypothetical protein NA 1Chr17:36049053–36054871 (-)5.308e-12
Glyma.18G108400 hypothetical protein NA 1Chr18:12370997–12390275 (-)6.698e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)4.935e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)8.882e-11
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)1.615e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)3.346e-11