Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P21171

Metabolite ID
P21171
Deionized mass
424.1563 Da
Average m/z
425.1625
Average RT
13.5007
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
52
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

52 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)8.266e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 3Chr18:47102746–47129707 (+)1.797e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)2.891e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)8.266e-11
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)2.833e-14
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)2.073e-12
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)7.744e-12
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)1.306e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)1.306e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)1.306e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)1.306e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)1.306e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)1.306e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)1.306e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.264e-11
Glyma.03G135300 hypothetical protein NA 1Chr03:35092248–35097578 (+)8.374e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.284e-15
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)4.798e-13
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)3.739e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.262e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.5e-20
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.275e-16
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)1.465e-11
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)1.465e-11
Glyma.07G068200 hypothetical protein AT4G00310:EDA8:Putative membrane lipoprotein 1Chr07:6146155–6148036 (-)4.784e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)4.025e-11
Glyma.11G241300 hypothetical protein AT4G39990:RABA4B:RAB GTPase homolog A4B 1Chr11:33552339–33555298 (+)1.975e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)1.948e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)9.184e-13
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)8.444e-11
Glyma.14G179900 hypothetical protein NA 1Chr14:44227886–44232217 (-)1.535e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.68e-16
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.209e-15
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.68e-16
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.68e-16
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.221e-15
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)7.528e-11
Glyma.16G105700 hypothetical protein NA 1Chr16:21404554–21412265 (-)5.547e-12
Glyma.16G105800 hypothetical protein NA 1Chr16:21409016–21412087 (-)5.547e-12
Glyma.16G106200 hypothetical protein NA 1Chr16:21463300–21469532 (+)5.547e-12
Glyma.16G111800 hypothetical protein AT2G17520:IRE1A:Endoribonuclease/protein kinase IRE1-like protein 1Chr16:24720965–24731678 (-)1.526e-11
Glyma.16G140000 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 1Chr16:29738375–29739010 (+)7.464e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)2.891e-12
Glyma.18G044100 hypothetical protein NA 1Chr18:3809348–3812858 (-)5.388e-12
Glyma.18G044200 hypothetical protein AT5G17300:RVE1:Homeodomain-like superfamily protein 1Chr18:3813589–3817289 (-)5.388e-12
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)1.836e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.562e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.562e-11
Glyma.20G106700 hypothetical protein NA 1Chr20:34925674–34930980 (-)9.043e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)8.859e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)3.999e-11
Glyma.20G108700 hypothetical protein AT1G09290:AT1G09290:uncharacterized protein 1Chr20:35109869–35115132 (-)9.307e-11