Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P21169

Metabolite ID
P21169
Deionized mass
748.2735 Da
Average m/z
749.2809
Average RT
13.5003
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
96
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

96 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)3.547e-19
Glyma.20G122600 hypothetical protein AT2G01130:AT2G01130:DEA(D/H)-box RNA helicase family protein 3Chr20:36527607–36546140 (-)5.074e-12
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 2Chr07:6270176–6283087 (-)4.335e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)3.043e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.913e-17
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.151e-13
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.401e-13
Glyma.02G151500 hypothetical protein AT2G47990:SWA1:transducin family protein / WD-40 repeat family protein 1Chr02:15586732–15588774 (+)6.649e-12
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)3.925e-11
Glyma.03G041900 hypothetical protein NA 1Chr03:5313339–5315847 (-)4.381e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)6.308e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)2.741e-15
Glyma.04G014300 hypothetical protein AT1G20880:AT1G20880:RNA-binding (RRM/RBD/RNP motifs) family protein 1Chr04:1101709–1106543 (+)1.43e-11
Glyma.04G014600 hypothetical protein NA 1Chr04:1119108–1123175 (+)1.43e-11
Glyma.04G015500 hypothetical protein AT2G33670:MLO5:Seven transmembrane MLO family protein 1Chr04:1176657–1181234 (-)1.425e-11
Glyma.04G018000 hypothetical protein AT5G42310:AT5G42310:Pentatricopeptide repeat (PPR-like) superfamily protein 1Chr04:1402993–1407323 (-)8.385e-12
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)3.798e-12
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)1.766e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.879e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)7.816e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.917e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.158e-11
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 1Chr06:6068728–6071360 (+)5.603e-12
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)1.065e-12
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)6.914e-12
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)6.915e-12
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)6.914e-12
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)1.62e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)7.363e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)7.363e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)7.363e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.585e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.585e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)6.505e-11
Glyma.06G303300 hypothetical protein NA 1Chr06:49275774–49276891 (+)5.51e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)6.958e-12
Glyma.08G139300 hypothetical protein AT2G22125:CSI1:binding protein 1Chr08:10653279–10664544 (-)2.265e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)1.697e-15
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)9.034e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)9.11e-13
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)9.11e-13
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)8.171e-11
Glyma.11G110100 hypothetical protein AT2G16510:AT2G16510:ATPase, F0/V0 complex, subunit C protein 1Chr11:8397135–8398949 (-)1.546e-11
Glyma.11G110300 hypothetical protein AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… 1Chr11:8402144–8406496 (-)2.894e-12
Glyma.11G179000 hypothetical protein AT2G27230:LHW:transcription factor-like protein 1Chr11:24412040–24417199 (+)1.314e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.15e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.306e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.306e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)6.623e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)6.623e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)6.623e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)6.38e-15
Glyma.13G156200 hypothetical protein AT1G80710:DRS1:DROUGHT SENSITIVE 1 1Chr13:27115515–27118951 (+)1.75e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)9.814e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)3.327e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)4.549e-16
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.151e-13
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.401e-13
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)5.119e-14
Glyma.15G107500 hypothetical protein NA 1Chr15:8435042–8443925 (+)1.779e-11
Glyma.15G107800 hypothetical protein AT1G64570:DUO3:Homeodomain-like superfamily protein 1Chr15:8473049–8483746 (+)2.559e-11
Glyma.15G111000 hypothetical protein AT1G62305:AT1G62305:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein__AT1G11940:AT1G11940:Cor… 1Chr15:8692505–8697919 (-)2.197e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)8.431e-12
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)1.161e-12
Glyma.16G024600 hypothetical protein AT1G01320:AT1G01320:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:2374161–2391216 (-)5.626e-11
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 1Chr16:2407161–2410997 (-)1.526e-11
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)8.646e-12
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)8.646e-12
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)1.828e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)9.002e-12
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)1.653e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)4.584e-12
Glyma.17G004500 hypothetical protein AT5G47800:AT5G47800:Phototropic-responsive NPH3 family protein 1Chr17:444580–451107 (-)5.262e-11
Glyma.17G005900 hypothetical protein AT4G17215:AT4G17215:Pollen Ole e 1 allergen and extensin family protein__AT2G40113:AT2G40113:Pollen Ole e 1 allergen an… 1Chr17:546212–548525 (+)5.262e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)5.238e-14
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)5.238e-14
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)2.072e-12
Glyma.17G212100 hypothetical protein NA 1Chr17:35010757–35014587 (+)2.831e-11
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)2.387e-12
Glyma.17G213000 hypothetical protein NA 1Chr17:35353582–35358772 (+)3.091e-11
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 1Chr17:36142245–36146771 (-)4.25e-12
Glyma.18G044600 hypothetical protein AT4G10710:SPT16:global transcription factor C 1Chr18:3846050–3851668 (+)8.747e-11
Glyma.18G044700 hypothetical protein NA 1Chr18:3846777–3847566 (+)8.747e-11
Glyma.18G044800 hypothetical protein NA 1Chr18:3854125–3856926 (+)8.747e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)1.301e-12
Glyma.18G204200 hypothetical protein NA 1Chr18:48697660–48700908 (+)9.024e-11
Glyma.18G213700 hypothetical protein NA 1Chr18:50068173–50075808 (-)2.015e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)3.198e-11
Glyma.18G274100 hypothetical protein AT5G38880:AUG5:HAUS augmin-like complex subunit 1Chr18:55672621–55681964 (+)3.204e-11
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)2.529e-11
Glyma.19G128100 hypothetical protein NA 1Chr19:38728037–38732422 (+)4.203e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)2.51e-14
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr19:41018746–41025024 (+)2.429e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)1.08e-11
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)7.231e-11
Glyma.20G122300 hypothetical protein NA 1Chr20:36506583–36511326 (-)5.074e-12