Overview Annotation GWAS Evidence Associated genes

P20892

Metabolite ID
P20892
Deionized mass
91.0493 Da
Average m/z
92.0568
Average RT
13.4252
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
7
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

7 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 3Chr03:2202325–2234931 (+)7.977e-11
Glyma.03G021000 hypothetical protein NA 2Chr03:2148298–2162954 (-)7.977e-11
Glyma.03G020800 hypothetical protein AT3G61050:NTMC2T4:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr03:2124895–2135692 (-)4.685e-14
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)8.561e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)2.655e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)2.655e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)2.655e-11