Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P20871

Metabolite ID
P20871
Deionized mass
300.1526 Da
Average m/z
301.1586
Average RT
13.4199
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
81
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

81 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)8.336e-12
Glyma.16G213000 hypothetical protein AT1G48380:RHL1:root hair initiation protein root hairless 1 (RHL1) 3Chr16:37118629–37125494 (-)2.918e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 3Chr20:34984922–34988496 (+)4.674e-14
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)2.496e-12
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)6.209e-12
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 2Chr08:9198213–9201688 (-)1.179e-15
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.509e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)4.95e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)9.281e-15
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)9.281e-15
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)1.37e-11
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)1.699e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.034e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.034e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)9.149e-11
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)3.956e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)3.007e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.588e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.536e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.796e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.796e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)2.538e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)4.665e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)6.21e-12
Glyma.08G118500 hypothetical protein NA 1Chr08:9161382–9162471 (+)4.423e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.509e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.509e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.509e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.509e-11
Glyma.09G003800 hypothetical protein NA 1Chr09:312735–314744 (-)8.115e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)2.698e-11
Glyma.11G061800 hypothetical protein NA 1Chr11:4632831–4633552 (+)4.622e-11
Glyma.11G117500 hypothetical protein NA 1Chr11:8932743–8933846 (-)5.45e-11
Glyma.11G184600 hypothetical protein AT4G08960:AT4G08960:phosphotyrosyl phosphatase activator (PTPA) family protein 1Chr11:25265163–25267323 (-)2.953e-11
Glyma.11G184900 hypothetical protein AT3G44530:HIRA:histone chaperone HIRA-like protein 1Chr11:25289268–25298978 (+)2.953e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.917e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.917e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.253e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.253e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.617e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)2.617e-12
Glyma.13G133800 hypothetical protein AT3G53520:UXS1:UDP-glucuronic acid decarboxylase 1 1Chr13:24601574–24606756 (-)4.194e-11
Glyma.13G133900 hypothetical protein NA 1Chr13:24613843–24616128 (+)4.194e-11
Glyma.13G134000 hypothetical protein NA 1Chr13:24618272–24619048 (-)4.194e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)4.95e-13
Glyma.13G135100 hypothetical protein AT5G02750:SGR9:RING/U-box superfamily protein 1Chr13:24744740–24746437 (+)3.587e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.625e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.625e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)9.281e-15
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)8.407e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)5.417e-12
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)1.099e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.099e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.686e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.505e-12
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)4.158e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)1.661e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)1.244e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)4.737e-13
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.13e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)7.511e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)5.245e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)3.643e-12
Glyma.16G173000 hypothetical protein NA 1Chr16:33365497–33367017 (+)4.253e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)5.424e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)8.643e-14
Glyma.16G189000 hypothetical protein NA 1Chr16:35160485–35167548 (-)4.421e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.698e-11
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 1Chr16:35177846–35179798 (+)4.384e-14
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)8.335e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)4.21e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)4.21e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)9.971e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)9.704e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.661e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.66e-11
Glyma.19G138700 hypothetical protein AT2G41740:VLN2:villin 2 1Chr19:40010487–40023584 (-)1.673e-11
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)4.65e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)9.461e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)1.719e-13
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)6.115e-11