Overview Annotation GWAS Evidence Associated genes

P20682

Metabolite ID
P20682
Deionized mass
482.2322 Da
Average m/z
483.2396
Average RT
13.3673
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G106600 hypothetical protein NA 2Chr18:11947553–11951868 (+)4.775e-11
Glyma.19G026200 hypothetical protein AT5G39420:cdc2cAt:CDC2C 2Chr19:3274957–3281320 (+)2.653e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)2.653e-11
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)6.873e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.114e-13
Glyma.03G073300 hypothetical protein AT1G79210:AT1G79210:N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 1Chr03:17770362–17785644 (+)4.755e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.725e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)3.25e-12
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)6.931e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)5.855e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.01e-12
Glyma.18G100300 hypothetical protein NA 1Chr18:10523838–10534676 (+)1.406e-11
Glyma.18G227400 hypothetical protein AT2G45720:AT2G45720:ARM repeat superfamily protein 1Chr18:51650951–51654636 (-)4.298e-11
Glyma.19G026100 hypothetical protein NA 1Chr19:3271594–3272980 (-)7.507e-11
Glyma.19G026800 hypothetical protein AT3G29185:AT3G29185:glutamate NMDA receptor subunit epsilon-1, putative (DUF3598) 1Chr19:3321092–3326098 (-)5.249e-11