Overview Annotation GWAS Evidence Associated genes

P20616

Metabolite ID
P20616
Deionized mass
249.1025 Da
Average m/z
250.1087
Average RT
13.3485
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
7
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

7 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)6.275e-13
Glyma.08G214500 hypothetical protein AT1G15740:AT1G15740:Leucine-rich repeat family protein 1Chr08:17333345–17342698 (+)9.008e-11
Glyma.10G058800 hypothetical protein NA 1Chr10:5433113–5435412 (+)1.413e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)6.275e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)2.073e-11
Glyma.16G199300 hypothetical protein AT4G25440:ZFWD1:zinc finger WD40 repeat protein 1 1Chr16:36062040–36068016 (-)3.735e-12
Glyma.16G199400 hypothetical protein NA 1Chr16:36071524–36075157 (+)3.735e-12