Overview Annotation GWAS Evidence Associated genes

P20380

Metabolite ID
P20380
Deionized mass
478.1094 Da
Average m/z
479.1159
Average RT
13.2920
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 2Chr03:169480–172727 (+)9.967e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.226e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.226e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)8.642e-13
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.314e-11
Glyma.03G223000 hypothetical protein AT1G02500:SAM1:S-adenosylmethionine synthetase 1 1Chr03:42579900–42582675 (+)9.035e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)5.181e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)5.181e-11
Glyma.16G051600 hypothetical protein AT5G41100:AT5G41100:hydroxyproline-rich glycoprotein family protein__AT3G26910:AT3G26910:hydroxyproline-rich glycoprote… 1Chr16:4963950–4972993 (-)1.093e-11
Glyma.16G189000 hypothetical protein NA 1Chr16:35160485–35167548 (-)3.204e-11
Glyma.16G198500 hypothetical protein AT5G52060:BAG1:BCL-2-associated athano 1 1Chr16:35943480–35946032 (+)5.48e-11