Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P20373

Metabolite ID
P20373
Deionized mass
303.1216 Da
Average m/z
304.1286
Average RT
13.2895
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
50
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

50 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G123500 hypothetical protein NA 3Chr08:9494946–9505931 (-)3.05e-13
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)5.805e-11
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)2.507e-15
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)2.507e-15
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)2.506e-15
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)3.506e-15
Glyma.02G081600 hypothetical protein NA 1Chr02:7054190–7055955 (-)4.118e-11
Glyma.02G296300 hypothetical protein AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein 1Chr02:47399263–47406220 (-)9.926e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)9.66e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)3.05e-13
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)3.05e-13
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)3.05e-13
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)3.05e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.19e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)8.574e-12
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)2.968e-12
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)3.491e-12
Glyma.09G272300 hypothetical protein AT5G01950:AT5G01950:Leucine-rich repeat protein kinase family protein 1Chr09:48873276–48883421 (-)9.361e-12
Glyma.09G272800 hypothetical protein AT3G08670:AT3G08670:serine/arginine repetitive matrix-like protein 1Chr09:48916725–48921396 (+)9.361e-12
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)2.507e-15
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)2.507e-15
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)2.507e-15
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)2.965e-13
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)2.507e-15
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)2.507e-15
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)1.46e-14
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)1.814e-12
Glyma.09G281400 hypothetical protein AT3G18620:AT3G18620:DHHC-type zinc finger family protein 1Chr09:49668985–49676216 (-)2.518e-11
Glyma.09G281700 hypothetical protein NA 1Chr09:49705303–49733182 (-)2.518e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)1.212e-11
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)8.223e-14
Glyma.11G162500 hypothetical protein AT2G40435:AT2G40435:transcription factor SCREAM-like protein 1Chr11:15087390–15090683 (-)6.987e-13
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)9.302e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)9.302e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)3.47e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.991e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)5.07e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.991e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.991e-12
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)9.519e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)5.826e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)5.712e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)5.712e-12
Glyma.16G147400 hypothetical protein NA 1Chr16:30817535–30821568 (+)2.394e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.002e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)3.368e-11
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)3.002e-11
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)3.368e-11
Glyma.18G100200 hypothetical protein NA 1Chr18:10512806–10522231 (+)3.368e-11
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)5.975e-11