Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P20285

Metabolite ID
P20285
Deionized mass
347.0349 Da
Average m/z
348.0450
Average RT
13.2639
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 4Chr16:30864919–30872425 (+)4.776e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.302e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.302e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.017e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)4.019e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)2.893e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)3.539e-13
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.9e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)8.788e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)8.786e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.688e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)3.707e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)3.708e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)3.707e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.9e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.784e-13
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)1.239e-14
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)5.061e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)5.061e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)5.061e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)5.061e-11
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)2.594e-12
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)2.594e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)6.85e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)5.436e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)5.436e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)5.436e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)5.436e-11
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)1.964e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)9.351e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)9.351e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.302e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.017e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)5.665e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)9.382e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)5.665e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)5.665e-12
Glyma.15G140400 hypothetical protein NA 1Chr15:11495189–11495691 (+)7.402e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)8.353e-11
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)1.837e-13
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 1Chr15:48661607–48665946 (-)5.457e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)3.457e-12
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)5.435e-12
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)3.103e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)2.592e-11