Overview Annotation GWAS Evidence Associated genes

P19935

Metabolite ID
P19935
Deionized mass
104.0245 Da
Average m/z
105.0317
Average RT
13.1614
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G051000 hypothetical protein AT1G19920:APS2:Pseudouridine synthase/archaeosine transglycosylase-like family protein 2Chr13:14742455–14747878 (-)2.578e-15
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)5.861e-14
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.875e-14
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.193e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)7.281e-11
Glyma.13G050500 hypothetical protein NA 1Chr13:14674243–14683099 (-)2.373e-14
Glyma.13G052100 hypothetical protein NA 1Chr13:14902730–14924713 (-)7.102e-20
Glyma.13G052800 hypothetical protein NA 1Chr13:15005141–15009623 (+)3.311e-13
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)6.129e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)6.129e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)6.79e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)5.053e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)5.816e-13