Overview Annotation GWAS Evidence Associated genes

P19902

Metabolite ID
P19902
Deionized mass
597.1385 Da
Average m/z
598.1462
Average RT
13.1516
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
24
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

24 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G135200 hypothetical protein NA 2Chr03:35070964–35078620 (+)2.159e-11
Glyma.02G193800 hypothetical protein AT5G06470:AT5G06470:Glutaredoxin family protein 1Chr02:36706657–36712744 (-)4.363e-11
Glyma.03G041800 hypothetical protein NA 1Chr03:5307518–5311842 (+)9.817e-11
Glyma.03G041900 hypothetical protein NA 1Chr03:5313339–5315847 (-)4.761e-11
Glyma.03G135300 hypothetical protein NA 1Chr03:35092248–35097578 (+)2.159e-11
Glyma.03G135600 hypothetical protein NA 1Chr03:35109981–35110632 (-)2.768e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)3.231e-14
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 1Chr05:31926976–31929133 (+)6.303e-13
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)7.401e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)7.401e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)7.401e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)7.401e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.679e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.795e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)7.802e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)8.662e-14
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.033e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.033e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.033e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.033e-12
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)3.172e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)3.172e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)3.172e-11
Glyma.13G142200 hypothetical protein AT1G33410:SAR1:SUPPRESSOR OF AUXIN RESISTANCE1 1Chr13:25483702–25502265 (+)3.552e-12