Overview Annotation GWAS Evidence Associated genes

P19887

Metabolite ID
P19887
Deionized mass
610.9038 Da
Average m/z
611.9048
Average RT
13.1462
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
22
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

22 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)2.429e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)4.142e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)2.817e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)2.817e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)2.817e-11
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)3.087e-12
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)3.087e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)5.419e-16
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)5.419e-16
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.904e-12
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)2.904e-12
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)7.692e-12
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)7.827e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)8.331e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.429e-12
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)5.124e-11
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)7.327e-11
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)3.581e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)4.142e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)3.151e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)7.48e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)7.48e-11