Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P19787

Metabolite ID
P19787
Deionized mass
793.2072 Da
Average m/z
794.2135
Average RT
13.1208
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
51
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

51 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.095e-11
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)1.388e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)6.454e-14
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)1.999e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)8.008e-12
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)3.609e-13
Glyma.17G153900 hypothetical protein AT5G46580:AT5G46580:pentatricopeptide (PPR) repeat-containing protein 2Chr17:12919733–12922117 (-)1.75e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.095e-11
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)1.359e-11
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)1.272e-14
Glyma.02G112500 hypothetical protein AT1G69400:AT1G69400:Transducin/WD40 repeat-like superfamily protein 1Chr02:10910270–10917963 (-)2.77e-12
Glyma.02G112900 hypothetical protein AT2G03350:AT2G03350:DUF538 family protein (Protein of unknown function, DUF538) 1Chr02:10933057–10936021 (-)2.77e-12
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)2.058e-13
Glyma.03G022900 hypothetical protein NA 1Chr03:2409690–2420328 (-)8.024e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.802e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.585e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.934e-22
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.606e-16
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.807e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.807e-11
Glyma.06G209300 hypothetical protein NA 1Chr06:20573671–20581076 (-)4.48e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)3.659e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)6.458e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)6.458e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)6.458e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)6.458e-11
Glyma.11G239000 hypothetical protein AT5G10120:AT5G10120:Ethylene insensitive 3 family protein 1Chr11:33337797–33339122 (-)6.436e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.281e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)2.281e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.078e-11
Glyma.13G204200 hypothetical protein NA 1Chr13:31822330–31826011 (+)6.776e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)7.887e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)7.887e-11
Glyma.16G066000 hypothetical protein AT5G40660:AT5G40660:ATP12 protein-like protein 1Chr16:6570689–6574950 (+)3.135e-11
Glyma.16G112600 hypothetical protein NA 1Chr16:25015407–25020098 (-)6.562e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)1.388e-12
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)1.388e-12
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)1.388e-12
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)1.388e-12
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)2.693e-11
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)7.28e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)1.999e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)1.999e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.704e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.051e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.051e-12
Glyma.17G154300 hypothetical protein AT5G46610:AT5G46610:aluminum activated malate transporter family protein 1Chr17:12986575–12990804 (-)9.588e-12
Glyma.18G073500 hypothetical protein AT3G44730:KP1:kinesin-like protein 1 1Chr18:6971929–6982758 (+)3.314e-13
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr19:472201–476152 (-)1.46e-12
Glyma.20G101700 hypothetical protein AT5G08580:AT5G08580:Calcium-binding EF hand family protein 1Chr20:34467936–34475476 (-)2.446e-11
Glyma.20G129900 hypothetical protein NA 1Chr20:37091399–37092697 (-)1.488e-11