Overview Annotation GWAS Evidence Associated genes

P19764

Metabolite ID
P19764
Deionized mass
538.3324 Da
Average m/z
539.3385
Average RT
13.1139
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)3.457e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.839e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)4.719e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)6.968e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)4.719e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)4.719e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)6.968e-12
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)5.132e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)5.675e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)3.457e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)3.457e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.155e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)3.363e-11
Glyma.11G000700 hypothetical protein AT4G34150:AT4G34150:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr11:33497–35198 (+)1.272e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.101e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)7.455e-11