Overview Annotation GWAS Evidence Associated genes

P19544

Metabolite ID
P19544
Deionized mass
138.0569 Da
Average m/z
139.0651
Average RT
13.0757
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
23
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

23 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)9.916e-15
Glyma.16G172500 hypothetical protein AT3G59140:ABCC10:multidrug resistance-associated protein 14 2Chr16:33322352–33330062 (+)8.635e-11
Glyma.03G022300 hypothetical protein AT3G60880:DHDPS1:dihydrodipicolinate synthase 1 1Chr03:2331191–2334210 (-)4.743e-13
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)4.74e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)8.488e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)2.831e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.92e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.92e-13
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)1.896e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)9.874e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)9.874e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)3.854e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)3.854e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)5.427e-13
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)4.51e-11
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)5.487e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)7.738e-12
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)7.738e-12
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)2.579e-11
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)2.579e-11
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)1.557e-11
Glyma.18G050100 hypothetical protein NA 1Chr18:4323734–4329696 (+)5.752e-13
Glyma.20G211500 hypothetical protein AT3G63410:APG1:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr20:44820994–44827443 (+)9.728e-11