Overview Annotation GWAS Evidence Associated genes

P19516

Metabolite ID
P19516
Deionized mass
357.1273 Da
Average m/z
358.1343
Average RT
13.0700
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G115900 hypothetical protein AT1G26480:GRF12:ral regulatory factor 12 1Chr02:11280858–11285984 (+)1.937e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.783e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.648e-13
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)4.163e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)3.239e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)3.239e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)8.51e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)8.51e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)6.194e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)6.194e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)6.194e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)2.309e-11
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)4.765e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.625e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.021e-11