Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P19514

Metabolite ID
P19514
Deionized mass
230.1137 Da
Average m/z
231.1207
Average RT
13.0695
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)3.594e-15
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)7.663e-12
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)2.888e-13
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)5.254e-12
Glyma.03G035400 hypothetical protein AT3G42630:AT3G42630:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:4282985–4285957 (-)4.733e-14
Glyma.03G035500 hypothetical protein NA 1Chr03:4289118–4294184 (+)1.207e-13
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)4.781e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.777e-13
Glyma.04G014300 hypothetical protein AT1G20880:AT1G20880:RNA-binding (RRM/RBD/RNP motifs) family protein 1Chr04:1101709–1106543 (+)4.558e-11
Glyma.04G014600 hypothetical protein NA 1Chr04:1119108–1123175 (+)4.558e-11
Glyma.04G082800 hypothetical protein NA 1Chr04:6977997–6983005 (-)6.323e-12
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)1.606e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.894e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)4.837e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)4.837e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)4.837e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.367e-18
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.878e-21
Glyma.08G191900 hypothetical protein AT3G13784:CWINV5:cell wall invertase 5 1Chr08:15431365–15437778 (-)9.053e-11
Glyma.08G192000 hypothetical protein AT3G13790:ATBFRUCT1:Glycosyl hydrolases family 32 protein 1Chr08:15440745–15445678 (-)9.053e-11
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)2.421e-13
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)4.553e-12
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)7.208e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.468e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.597e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.597e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.597e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.597e-11
Glyma.11G058500 hypothetical protein AT4G37190:AT4G37190:plasma membrane, autoregulation-binding site, misato segment II, myosin-like, tubulin/FtsZ protein 1Chr11:4417029–4423791 (-)9.93e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.054e-13
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.054e-13
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.358e-18
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.358e-18
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)5.641e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)5.641e-12
Glyma.13G081100 hypothetical protein NA 1Chr13:18881427–18886462 (-)9.778e-11
Glyma.13G149700 hypothetical protein AT3G10040:AT3G10040:sequence-specific DNA binding transcription factor 1Chr13:26321941–26324172 (+)6.611e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)8.582e-12
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)9.211e-12
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)9.211e-12
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)5.524e-13
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.282e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.282e-11
Glyma.18G055400 hypothetical protein NA 1Chr18:4824726–4828902 (+)9.238e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)3.315e-13