Overview Annotation GWAS Evidence Associated genes

P19453

Metabolite ID
P19453
Deionized mass
680.1556 Da
Average m/z
681.1645
Average RT
13.0544
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
10
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

10 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G202700 hypothetical protein NA 6Chr06:18882217–18887782 (+)2.768e-12
Glyma.05G204600 hypothetical protein NA 1Chr05:38801528–38802396 (+)5.134e-11
Glyma.05G204700 hypothetical protein AT1G12780:UGE1:UDP-D-glucose/UDP-D-galactose 4-epimerase 1 1Chr05:38804306–38807296 (-)9.937e-12
Glyma.05G204900 hypothetical protein NA 1Chr05:38822675–38824623 (+)7.756e-13
Glyma.05G205600 hypothetical protein AT1G63260:TET10:tetraspanin10 1Chr05:38854812–38858788 (-)4.618e-12
Glyma.05G218600 hypothetical protein NA 1Chr05:39830080–39834574 (+)7.004e-12
Glyma.05G219000 hypothetical protein AT4G10840:KLCR1:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr05:39861100–39864610 (-)7.004e-12
Glyma.06G202300 SF3'H1 flavonoid 3'-hydroxylase AT5G07990:TT7:Cytochrome P450 superfamily protein 1Chr06:18731105–18738025 (+)2.211e-15
Glyma.06G202500 DExH-box ATP-dependent RNA helicase DExH14 AT5G61140:AT5G61140:U5 small nuclear ribonucleoprotein helicase 1Chr06:18799681–18856166 (-)2.768e-12
Glyma.06G202800 hypothetical protein NA 1Chr06:18895459–18896645 (+)2.768e-12