Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P19380

Metabolite ID
P19380
Deionized mass
400.1393 Da
Average m/z
401.1461
Average RT
13.0281
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
49
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

49 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G196900 hypothetical protein NA 3Chr16:35841279–35846894 (-)1.609e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 2Chr08:9435391–9437279 (+)2.07e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.255e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)1.425e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)9.355e-16
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)9.355e-16
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)3.917e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)2.519e-12
Glyma.15G263500 hypothetical protein AT1G79440:ALDH5F1:aldehyde dehydrogenase 5F1 2Chr15:49664672–49682418 (+)1.005e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.759e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.759e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.751e-11
Glyma.03G146400 hypothetical protein AT2G41970:AT2G41970:Protein kinase superfamily protein 1Chr03:36170481–36174029 (+)8.841e-11
Glyma.03G146500 hypothetical protein AT2G41960:AT2G41960:uncharacterized protein 1Chr03:36181312–36189521 (+)8.841e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)7.621e-14
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)7.461e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)1.684e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.785e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.785e-11
Glyma.06G284900 BZIP50 bZIP transcription factor bZIP50 AT3G58120:BZIP61:Basic-leucine zipper (bZIP) transcription factor family protein__AT2G42380:BZIP34:Basic-leucine zipper… 1Chr06:47339957–47343650 (-)1.875e-13
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)7.322e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)6.101e-11
Glyma.08G104000 hypothetical protein NA 1Chr08:7976043–7980358 (+)3.627e-12
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)1.233e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.255e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.255e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.255e-12
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)1.448e-11
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 1Chr12:3949453–3957386 (-)1.928e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)5.845e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)5.845e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)5.01e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)5.01e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)5.745e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.425e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.888e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.888e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)9.355e-16
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)3.917e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.519e-12
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)9.2e-12
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)1.249e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)7.35e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)3.135e-13
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)6.6e-11
Glyma.18G039500 hypothetical protein AT5G37770:TCH2:EF hand calcium-binding protein family 1Chr18:3218263–3219353 (+)5.44e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.14e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.14e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)9.553e-11