Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P19231

Metabolite ID
P19231
Deionized mass
916.2860 Da
Average m/z
917.2952
Average RT
12.9877
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
44
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

44 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G100200 hypothetical protein NA 2Chr18:10512806–10522231 (+)1.752e-11
Glyma.18G106600 hypothetical protein NA 2Chr18:11947553–11951868 (+)5.856e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.98e-15
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)1.177e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)6.617e-12
Glyma.05G121000 hypothetical protein AT3G26410:TRM11:tRNA modification 11 protein 1Chr05:31383894–31387543 (-)8.37e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.965e-12
Glyma.06G073700 hypothetical protein AT2G25660:emb2410:embryo defective 2410 1Chr06:5670056–5689370 (-)5.498e-12
Glyma.06G074700 hypothetical protein AT2G25730:AT2G25730:zinc finger FYVE domain protein 1Chr06:5758402–5786537 (-)5.498e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)8.899e-14
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)8.899e-14
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)7.302e-11
Glyma.07G068400 hypothetical protein AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein 1Chr07:6173172–6180430 (-)9.018e-11
Glyma.07G068600 hypothetical protein NA 1Chr07:6192764–6197166 (+)9.018e-11
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)6.37e-11
Glyma.07G068800 hypothetical protein NA 1Chr07:6211775–6221107 (-)6.37e-11
Glyma.07G069100 hypothetical protein NA 1Chr07:6246145–6250192 (+)9.018e-11
Glyma.07G073100 hypothetical protein NA 1Chr07:6656839–6661250 (-)6.105e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)1.158e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)7.387e-12
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)1.76e-11
Glyma.09G053800 hypothetical protein NA 1Chr09:4737413–4755632 (-)9.552e-11
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)9.924e-11
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)4.535e-12
Glyma.10G080600 hypothetical protein NA 1Chr10:9501678–9504456 (+)3.476e-12
Glyma.10G080700 hypothetical protein NA 1Chr10:9510013–9512097 (+)3.476e-12
Glyma.10G080900 hypothetical protein NA 1Chr10:9552268–9552854 (+)3.476e-12
Glyma.12G203300 hypothetical protein AT4G03430:EMB2770:pre-mRNA splicing factor-like protein 1Chr12:36371465–36377700 (-)4.907e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)8.86e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)2.68e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.718e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)2.5e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)2.041e-11
Glyma.18G098900 hypothetical protein NA 1Chr18:10297476–10305043 (+)7.249e-11
Glyma.18G099000 hypothetical protein AT5G54920:AT5G54920:polyadenylate-binding protein interacting protein 1Chr18:10326925–10347143 (-)7.249e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)1.752e-11
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)1.073e-11
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)1.752e-11
Glyma.18G100300 hypothetical protein NA 1Chr18:10523838–10534676 (+)1.723e-12
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)1.853e-11
Glyma.18G252100 hypothetical protein AT1G02090:FUS5:Proteasome component (PCI) domain protein 1Chr18:53885762–53894767 (+)9.638e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.91e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.91e-12
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)6.896e-14