Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P19209

Metabolite ID
P19209
Deionized mass
242.1483 Da
Average m/z
243.1558
Average RT
12.9813
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
48
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

48 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)5.42e-11
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)7.779e-12
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)6.649e-11
Glyma.16G105100 hypothetical protein NA 2Chr16:21259552–21267517 (-)2.261e-11
Glyma.18G100200 hypothetical protein NA 2Chr18:10512806–10522231 (+)4.673e-12
Glyma.02G081600 hypothetical protein NA 1Chr02:7054190–7055955 (-)4.524e-11
Glyma.02G081900 hypothetical protein AT1G43650:UMAMIT22:nodulin MtN21 /EamA-like transporter family protein 1Chr02:7075646–7080163 (-)9.046e-12
Glyma.02G294500 hypothetical protein AT5G50850:MAB1:Transketolase family protein 1Chr02:47272683–47277831 (-)9.353e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.521e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)5.95e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)9.514e-16
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.475e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.261e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.113e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.113e-12
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)1.894e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.784e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.249e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.437e-11
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)3.304e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)9.722e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)3.961e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)4.441e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)4.441e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.808e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.808e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)5.808e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)5.808e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)5.758e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.326e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)1.134e-12
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)8.423e-12
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)2.129e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)8.899e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.204e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)8.303e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)4.99e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)5.42e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)3.491e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)3.491e-12
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)7.779e-12
Glyma.18G098900 hypothetical protein NA 1Chr18:10297476–10305043 (+)1.828e-11
Glyma.18G099000 hypothetical protein AT5G54920:AT5G54920:polyadenylate-binding protein interacting protein 1Chr18:10326925–10347143 (-)1.828e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)4.673e-12
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)3.922e-12
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)4.673e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)7.393e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)7.394e-11