Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P19129

Metabolite ID
P19129
Deionized mass
411.1939 Da
Average m/z
412.2016
Average RT
12.9459
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
48
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

48 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)2.942e-11
Glyma.16G078200 hypothetical protein AT3G21600:AT3G21600:Senescence/dehydration-associated protein-like protein 2Chr16:8060944–8066661 (-)3.748e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)5.327e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)9.623e-12
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)3.126e-11
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)5.843e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)5.843e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)5.843e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)5.843e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)5.843e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)5.843e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)5.843e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)4.048e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)4.048e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.812e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.887e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)5.137e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.393e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.393e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.393e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.393e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)6.929e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)4.61e-11
Glyma.11G061800 hypothetical protein NA 1Chr11:4632831–4633552 (+)2.758e-11
Glyma.11G062400 hypothetical protein AT4G36860:AT4G36860:LIM domain-containing protein 1Chr11:4720040–4726569 (+)1.733e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)7.298e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)7.298e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.983e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.983e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.29e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)2.29e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)2.29e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)9.791e-11
Glyma.16G093700 hypothetical protein NA 1Chr16:15100987–15107038 (+)4.25e-11
Glyma.16G093800 hypothetical protein NA 1Chr16:15144247–15160454 (-)4.25e-11
Glyma.16G094200 hypothetical protein NA 1Chr16:15770075–15772475 (-)4.25e-11
Glyma.16G094300 hypothetical protein AT5G44650:CEST:death domain associated protein 1Chr16:15796268–15811033 (-)4.25e-11
Glyma.16G094500 hypothetical protein AT1G30825:DIS2:Arp2/3 complex, 34 kD subunit p34-Arc 1Chr16:15914865–15930406 (-)4.25e-11
Glyma.16G095100 hypothetical protein AT1G32080:LrgB:uncharacterized protein 1Chr16:16891012–16896814 (-)4.25e-11
Glyma.16G095200 hypothetical protein AT2G35530:bZIP16:basic region/leucine zipper transcription factor 16 1Chr16:16911412–16924907 (-)4.25e-11
Glyma.16G096000 Site-2 protease AT4G20310:AT4G20310:Peptidase M50 family protein 1Chr16:17694666–17720668 (+)4.25e-11
Glyma.16G096600 hypothetical protein AT5G58140:PHOT2:phototropin 2 1Chr16:18621149–18647713 (-)4.25e-11
Glyma.16G096900 hypothetical protein AT1G68690:PERK9:Protein kinase superfamily protein 1Chr16:18767931–18777350 (-)4.25e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)3.175e-12
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)1.156e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.574e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)8.848e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)3.71e-12