Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P19100

Metabolite ID
P19100
Deionized mass
434.1708 Da
Average m/z
435.1769
Average RT
12.9375
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
71
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

71 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)4.458e-15
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)6.104e-11
Glyma.08G147500 hypothetical protein AT3G18680:AT3G18680:Amino acid kinase family protein 2Chr08:11253074–11256505 (+)3.558e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.213e-15
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.214e-15
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)4.817e-11
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)2.519e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)1.294e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.492e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)3.476e-12
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)7.496e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.961e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.906e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.184e-12
Glyma.07G068400 hypothetical protein AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein 1Chr07:6173172–6180430 (-)6.741e-11
Glyma.07G068600 hypothetical protein NA 1Chr07:6192764–6197166 (+)6.741e-11
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)4.159e-11
Glyma.07G068800 hypothetical protein NA 1Chr07:6211775–6221107 (-)4.159e-11
Glyma.07G069100 hypothetical protein NA 1Chr07:6246145–6250192 (+)6.741e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)4.146e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)6.104e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)6.104e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)6.104e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)6.104e-11
Glyma.08G147200 hypothetical protein AT3G18710:PUB29:plant U-box 29__AT5G64660:CMPG2:CYS, MET, PRO, and GLY protein 2 1Chr08:11225587–11227445 (+)2.217e-11
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 1Chr08:11525692–11536927 (+)5.173e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)1.705e-11
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)3.81e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)8.117e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)9.021e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)5.564e-13
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)5.564e-13
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)5.564e-13
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)5.564e-13
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.897e-13
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.315e-12
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)2.126e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)2.491e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)2.491e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)2.491e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.198e-14
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.198e-14
Glyma.12G193800 hypothetical protein AT2G05710:ACO3:aconitase 3 1Chr12:35551596–35559129 (+)2.763e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)4.457e-15
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)2.315e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)3.093e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)3.093e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.213e-15
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)1.842e-13
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)8.619e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)2.359e-13
Glyma.14G071900 hypothetical protein AT1G19650:AT1G19650:Sec14p-like phosphatidylinositol transfer family protein__AT1G75370:AT1G75370:Sec14p-like phosphati… 1Chr14:6043655–6049030 (+)2.359e-13
Glyma.14G072200 Ipk1 AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family pr… 1Chr14:6059598–6063755 (-)6.335e-16
Glyma.15G047100 hypothetical protein AT1G71240:AT1G71240:chromosome-partitioning protein, putative (DUF639) 1Chr15:3736217–3746037 (+)4.19e-11
Glyma.15G047800 hypothetical protein AT1G33270:AT1G33270:Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein 1Chr15:3777567–3783739 (+)4.19e-11
Glyma.15G048200 hypothetical protein AT1G25260:AT1G25260:Ribosomal protein L10 family protein 1Chr15:3812816–3815263 (+)4.333e-11
Glyma.15G049000 hypothetical protein NA 1Chr15:3866108–3867740 (+)8.05e-11
Glyma.15G049800 hypothetical protein NA 1Chr15:3927843–3933656 (-)6.455e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.417e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.324e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.417e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.417e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.515e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)7.145e-14
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)6.542e-14
Glyma.16G196400 hypothetical protein AT5G07270:XBAT33:uncharacterized protein 1Chr16:35782198–35790495 (-)8.327e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.571e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.571e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)8.325e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.615e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.615e-11