Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P18854

Metabolite ID
P18854
Deionized mass
339.0993 Da
Average m/z
340.1099
Average RT
12.8617
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
57
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

57 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)4.25e-11
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)2.414e-15
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)2.414e-15
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)2.414e-15
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)3.836e-19
Glyma.11G145000 hypothetical protein AT4G27490:RRP41L:3'-5'-exoribonuclease family protein 2Chr11:11117760–11123162 (+)8.282e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)4.845e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)4.25e-11
Glyma.01G176400 hypothetical protein AT1G63810:AT1G63810:nucleolar protein 1Chr01:51285599–51295173 (-)6.463e-13
Glyma.02G138200 hypothetical protein NA 1Chr02:14307786–14310106 (-)1.209e-12
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)1.696e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)2.418e-11
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)1.109e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)4.088e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)8.071e-17
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)1.215e-15
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)4.025e-15
Glyma.06G038900 hypothetical protein AT5G42700:AT5G42700:AP2/B3-like transcriptional factor family protein 1Chr06:2943383–2947586 (+)4.111e-11
Glyma.06G039000 hypothetical protein AT1G47380:AT1G47380:Protein phosphatase 2C family protein 1Chr06:2949704–2954653 (+)4.134e-11
Glyma.06G190300 hypothetical protein AT1G74730:AT1G74730:transmembrane protein, putative (DUF1118) 1Chr06:16709212–16710732 (-)4.302e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)1.824e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)2.84e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.387e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.183e-11
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)2.768e-13
Glyma.09G187600 hypothetical protein AT5G19460:NUDT20:nudix hydrolase homolog 20 1Chr09:41213588–41217191 (+)3.33e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)1.615e-12
Glyma.09G269100 hypothetical protein NA 1Chr09:48651429–48653656 (-)3.318e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)2.692e-15
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)3.59e-14
Glyma.09G272300 hypothetical protein AT5G01950:AT5G01950:Leucine-rich repeat protein kinase family protein 1Chr09:48873276–48883421 (-)8.897e-15
Glyma.09G272800 hypothetical protein AT3G08670:AT3G08670:serine/arginine repetitive matrix-like protein 1Chr09:48916725–48921396 (+)8.897e-15
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)2.414e-15
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)2.414e-15
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)2.413e-15
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)1.45e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)2.414e-15
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)2.414e-15
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)3.573e-14
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)7.219e-18
Glyma.09G281400 hypothetical protein AT3G18620:AT3G18620:DHHC-type zinc finger family protein 1Chr09:49668985–49676216 (-)1.629e-16
Glyma.09G281700 hypothetical protein NA 1Chr09:49705303–49733182 (-)1.629e-16
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)6.053e-14
Glyma.10G037300 hypothetical protein AT3G54670:TTN8:Structural maintenance of chromosomes (SMC) family protein 1Chr10:3270545–3283318 (-)3.625e-14
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)6.671e-11
Glyma.11G144800 hypothetical protein AT2G28250:NCRK:Protein kinase superfamily protein 1Chr11:11096950–11105343 (+)8.282e-11
Glyma.12G198700 hypothetical protein AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr12:36001658–36004086 (+)3.311e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)8.277e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)4.706e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)6.095e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)6.095e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)6.095e-12
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)6.572e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)9.989e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)9.988e-12
Glyma.20G211500 hypothetical protein AT3G63410:APG1:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr20:44820994–44827443 (+)4.158e-11
Glyma.20G219100 hypothetical protein AT3G02830:ZFN1:zinc finger protein 1 1Chr20:45490419–45496014 (+)1.259e-11