Overview Annotation GWAS Evidence Associated genes

P18760

Metabolite ID
P18760
Deionized mass
398.5839 Da
Average m/z
399.5908
Average RT
12.8354
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
14
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

14 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G187700 hypothetical protein AT3G24420:AT3G24420:alpha/beta-Hydrolases superfamily protein 2Chr09:41217358–41221592 (-)4.373e-11
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)7.411e-12
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)1.724e-11
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)1.724e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.087e-15
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.087e-15
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)4.041e-14
Glyma.08G227900 hypothetical protein NA 1Chr08:18551920–18567339 (-)1.847e-13
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)1.321e-18
Glyma.09G187600 hypothetical protein AT5G19460:NUDT20:nudix hydrolase homolog 20 1Chr09:41213588–41217191 (+)6.566e-15
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)4.805e-12
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)3.445e-11
Glyma.18G259000 hypothetical protein NA 1Chr18:54442402–54446789 (-)1.677e-13
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)5.15e-12