Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P18740

Metabolite ID
P18740
Deionized mass
741.6856 Da
Average m/z
742.6941
Average RT
12.8339
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
54
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

54 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 5Chr16:36856833–36863994 (-)1.155e-12
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 3Chr19:1134716–1143232 (+)3.367e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.011e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 2Chr16:36806718–36809299 (+)5.964e-15
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)1.111e-12
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)7.587e-13
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)8.742e-16
Glyma.03G022900 hypothetical protein NA 1Chr03:2409690–2420328 (-)6.934e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.71e-11
Glyma.03G031700 hypothetical protein AT1G79600:AT1G79600:Protein kinase superfamily protein 1Chr03:3567906–3572939 (-)2.615e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)9.007e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.501e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.001e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.001e-11
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)5.759e-11
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)5.759e-11
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)6.198e-11
Glyma.06G134900 hypothetical protein AT4G27670:HSP21:heat shock protein 21 1Chr06:11083841–11088991 (+)2.677e-11
Glyma.06G135100 hypothetical protein NA 1Chr06:11096995–11099852 (+)5.427e-11
Glyma.06G135300 hypothetical protein NA 1Chr06:11125203–11130757 (-)3.131e-11
Glyma.06G135400 hypothetical protein NA 1Chr06:11125473–11126625 (+)3.131e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)8.83e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)5.002e-11
Glyma.08G132700 hypothetical protein NA 1Chr08:10163807–10167725 (-)1.583e-11
Glyma.08G141100 hypothetical protein AT5G64910:AT5G64910:Serine/Threonine-kinase 1Chr08:10778910–10784589 (-)5.458e-13
Glyma.08G142200 hypothetical protein NA 1Chr08:10833827–10834390 (-)2.054e-11
Glyma.08G142400 WRKY6 WRKY transcription factor 6 NA 1Chr08:10843433–10846761 (-)2.054e-11
Glyma.08G142500 hypothetical protein NA 1Chr08:10848944–10850129 (+)7.691e-11
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)4.805e-13
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)3.41e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.011e-12
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)1.313e-16
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:5656328–5663040 (-)5.243e-14
Glyma.16G058000 hypothetical protein AT5G15750:AT5G15750:Alpha-L RNA-binding motif/Ribosomal protein S4 family protein 1Chr16:5674056–5677758 (+)8.119e-14
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 1Chr16:5685464–5692098 (+)7.845e-17
Glyma.16G207800 hypothetical protein AT4G15093:LigB:catalytic LigB subunit of aromatic ring-opening dioxygenase family 1Chr16:36750028–36751833 (-)9.338e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)3.32e-13
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)1.593e-11
Glyma.17G038400 hypothetical protein AT3G17330:ECT6:evolutionarily conserved C-terminal region 6 1Chr17:2836787–2841979 (-)3.925e-11
Glyma.17G038500 hypothetical protein NA 1Chr17:2843533–2853547 (-)3.925e-11
Glyma.17G258700 hypothetical protein AT4G24190:SHD:Chaperone protein htpG family protein 1Chr17:41280124–41284980 (-)7.443e-11
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)1.604e-11
Glyma.18G106700 hypothetical protein NA 1Chr18:11956201–11957138 (-)4.151e-11
Glyma.18G106800 hypothetical protein AT2G42880:MPK20:MAP kinase 20 1Chr18:11959920–11966545 (-)4.151e-11
Glyma.18G227400 hypothetical protein AT2G45720:AT2G45720:ARM repeat superfamily protein 1Chr18:51650951–51654636 (-)1.28e-12
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)6.16e-15
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)1.111e-12
Glyma.19G102000 ICE2 AT3G26744:ICE1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr19:34998146–35001862 (+)3.21e-13
Glyma.19G102200 hypothetical protein AT2G31410:AT2G31410:coiled-coil protein 1Chr19:35024582–35025690 (+)3.21e-13
Glyma.19G194300 Dt1 AT5G03840:TFL1:PEBP (phosphatidylethanolamine-binding protein) family protein 1Chr19:45183357–45185175 (-)4.719e-12
Glyma.19G194500 hypothetical protein AT2G36270:ABI5:Basic-leucine zipper (bZIP) transcription factor family protein 1Chr19:45201612–45206816 (+)4.719e-12
Glyma.19G194800 hypothetical protein AT2G36250:FTSZ2-1:Tubulin/FtsZ family protein 1Chr19:45215929–45223182 (+)4.719e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)5.617e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)4.078e-11