Overview Annotation GWAS Evidence Associated genes

P18713

Metabolite ID
P18713
Deionized mass
248.0515 Da
Average m/z
249.0590
Average RT
12.8307
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
25
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

25 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 3Chr16:35831912–35835153 (+)2.803e-13
Glyma.01G045600 hypothetical protein NA 2Chr01:5242432–5245038 (-)4.989e-11
Glyma.03G246500 hypothetical protein AT5G49570:PNG1:peptide-N-glycanase 1 2Chr03:44341465–44350438 (-)9.718e-11
Glyma.16G137600 hypothetical protein NA 2Chr16:29468438–29472890 (-)4.98e-13
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)4.989e-11
Glyma.03G246600 hypothetical protein NA 1Chr03:44355048–44357092 (+)9.718e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.311e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.812e-18
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.688e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)2.201e-11
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)8.436e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)4.76e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.574e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)4.127e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.574e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.574e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)6.131e-11
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)1.731e-12
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)7.055e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.441e-16
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)6.637e-12
Glyma.16G197900 hypothetical protein NA 1Chr16:35904120–35909034 (+)1.304e-11
Glyma.18G108400 hypothetical protein NA 1Chr18:12370997–12390275 (-)3.216e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.816e-13
Glyma.20G112900 hypothetical protein AT2G39210:AT2G39210:Major facilitator superfamily protein 1Chr20:35498179–35500565 (-)9.703e-11