Overview Annotation GWAS Evidence Associated genes

P18648

Metabolite ID
P18648
Deionized mass
178.0597 Da
Average m/z
179.0674
Average RT
12.8139
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
31
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

31 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G137600 hypothetical protein NA 4Chr16:29468438–29472890 (-)1.445e-13
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)8.342e-12
Glyma.16G137800 hypothetical protein NA 2Chr16:29480352–29487400 (-)7.231e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)8.342e-12
Glyma.01G010400 SLTI248 DEAD-box RNA helicase AT1G31970:STRS1:DEA(D/H)-box RNA helicase family protein 1Chr01:1009200–1013846 (+)6.569e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)6.171e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)4.327e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.232e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.915e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.988e-19
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.208e-14
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)6.416e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.163e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.163e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)8.691e-12
Glyma.13G193900 hypothetical protein NA 1Chr13:30714547–30714981 (-)2.762e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.839e-11
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 1Chr15:48661607–48665946 (-)4.657e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)7.684e-11
Glyma.16G137900 hypothetical protein NA 1Chr16:29480980–29481438 (+)7.231e-11
Glyma.16G138500 hypothetical protein NA 1Chr16:29564872–29566190 (+)2.731e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)1.201e-11
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)2.483e-11
Glyma.16G161500 hypothetical protein NA 1Chr16:32076715–32092322 (-)1.557e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr16:35831912–35835153 (+)5.26e-11
Glyma.18G293100 hypothetical protein NA 1Chr18:57124192–57128652 (+)4.965e-11
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)1.187e-11
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)5.163e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)9.594e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)3.36e-12
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)5.913e-11