Overview Annotation GWAS Evidence Associated genes

P18607

Metabolite ID
P18607
Deionized mass
308.0900 Da
Average m/z
309.0988
Average RT
12.7969
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
18
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

18 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.677e-13
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)3.321e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.932e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)4.288e-13
Glyma.05G147700 hypothetical protein NA 1Chr05:34199925–34202541 (+)2.05e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)7.466e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.68e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.635e-12
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)8.453e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)8.453e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)8.453e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)9.513e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.677e-13
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.677e-13
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.677e-13
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.677e-13
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)6.537e-13
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)8.937e-11