Overview Annotation GWAS Evidence Associated genes

P18563

Metabolite ID
P18563
Deionized mass
476.2115 Da
Average m/z
477.2163
Average RT
12.7862
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
18
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

18 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)5.602e-12
Glyma.06G201700 hypothetical protein NA 2Chr06:18577883–18617874 (+)3.955e-12
Glyma.17G216200 hypothetical protein NA 2Chr17:36422091–36424823 (+)1.501e-11
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)1.169e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.979e-12
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)1.804e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.604e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)7.811e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.064e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)9.237e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)8.538e-11
Glyma.11G090300 hypothetical protein AT4G19190:AT4G19190:zinc knuckle (CCHC-type) family protein 1Chr11:6849007–6855564 (+)1.111e-13
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)8.674e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)7.852e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.845e-13
Glyma.16G161500 hypothetical protein NA 1Chr16:32076715–32092322 (-)4.447e-11
Glyma.16G166900 hypothetical protein NA 1Chr16:32619260–32629262 (-)5.845e-11
Glyma.17G216300 hypothetical protein NA 1Chr17:36440074–36440277 (-)1.501e-11