Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P18349

Metabolite ID
P18349
Deionized mass
842.2142 Da
Average m/z
843.2222
Average RT
12.7461
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
40
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

40 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G198600 hypothetical protein AT3G07940:AT3G07940:Calcium-dependent ARF-type GTPase activating protein family 2Chr13:31233913–31240731 (-)1.46e-11
Glyma.20G108700 hypothetical protein AT1G09290:AT1G09290:uncharacterized protein 2Chr20:35109869–35115132 (-)3.833e-15
Glyma.02G062700 hypothetical protein AT3G50410:OBP1:OBF binding protein 1__AT5G66940:AT5G66940:Dof-type zinc finger DNA-binding family protein 1Chr02:5654059–5654763 (+)7.109e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)4.933e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)7.196e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.89e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)6.605e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)6.605e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)6.605e-11
Glyma.05G217100 hypothetical protein AT1G64440:RHD1:NAD(P)-binding Rossmann-fold superfamily protein 1Chr05:39735139–39739763 (+)8.964e-11
Glyma.05G220900 hypothetical protein NA 1Chr05:40040654–40043504 (+)2.2e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.903e-11
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)7.366e-11
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)7.366e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)7.797e-15
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)2.279e-14
Glyma.10G172600 hypothetical protein AT5G41900:AT5G41900:alpha/beta-Hydrolases superfamily protein__AT1G64670:BDG1:alpha/beta-Hydrolases superfamily protein 1Chr10:40628401–40633140 (-)1.635e-12
Glyma.11G183200 hypothetical protein AT2G27500:AT2G27500:Glycosyl hydrolase superfamily protein 1Chr11:25070908–25075185 (-)9.504e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)8.966e-13
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)8.966e-13
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.23e-16
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.23e-16
Glyma.13G198800 hypothetical protein NA 1Chr13:31252110–31257733 (-)1.46e-11
Glyma.15G107500 hypothetical protein NA 1Chr15:8435042–8443925 (+)5.694e-12
Glyma.15G107800 hypothetical protein AT1G64570:DUO3:Homeodomain-like superfamily protein 1Chr15:8473049–8483746 (+)3.427e-11
Glyma.15G109500 hypothetical protein AT4G22030:AT4G22030:F-box protein with a domain protein 1Chr15:8591856–8593774 (-)4.463e-11
Glyma.15G110200 hypothetical protein NA 1Chr15:8634006–8639001 (-)7.572e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.309e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.047e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.309e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.309e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)8.455e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)7.45e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)8.931e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.56e-13
Glyma.16G172500 hypothetical protein AT3G59140:ABCC10:multidrug resistance-associated protein 14 1Chr16:33322352–33330062 (+)9.392e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)3.178e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)9.689e-11
Glyma.19G247800 hypothetical protein NA 1Chr19:49385792–49388122 (-)2.666e-12
Glyma.20G108600 hypothetical protein NA 1Chr20:35099991–35104464 (+)3.351e-12