Overview Annotation GWAS Evidence Associated genes

P18248

Metabolite ID
P18248
Deionized mass
170.1035 Da
Average m/z
171.1104
Average RT
12.7248
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
34
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

34 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.176e-13
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)1.741e-13
Glyma.01G017900 hypothetical protein NA 1Chr01:1734474–1735545 (+)1.609e-11
Glyma.01G018800 hypothetical protein AT4G17870:PYR1:Polyketide cyclase/dehydrase and lipid transport superfamily protein 1Chr01:1803842–1805405 (-)9.754e-12
Glyma.01G019200 hypothetical protein AT4G37870:PCK1:phosphoenolpyruvate carboxykinase 1__AT5G65690:PCK2:phosphoenolpyruvate carboxykinase 2 1Chr01:1839153–1846859 (-)1.223e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)2.396e-11
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)7.687e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.041e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.294e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)3.996e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)3.996e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)3.996e-11
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)8.081e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)4.689e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)4.689e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)5.167e-13
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)3.453e-16
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.741e-13
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)7.823e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)9.703e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)3.253e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.253e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)7.457e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)7.457e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)7.457e-11
Glyma.15G261800 hypothetical protein AT1G56180:AT1G56180:ATP-dependent zinc metalloprotease 1Chr15:49400638–49411737 (-)3.666e-11
Glyma.16G112600 hypothetical protein NA 1Chr16:25015407–25020098 (-)5.619e-12
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)8.348e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)5.82e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.163e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)6.342e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)6.342e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)3.068e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)1.643e-11