Overview Annotation GWAS Evidence Associated genes

P18164

Metabolite ID
P18164
Deionized mass
440.0931 Da
Average m/z
441.1004
Average RT
12.7103
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.10G005600 hypothetical protein AT4G14350:AT4G14350:AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein 3Chr10:560190–573484 (-)8.856e-12
Glyma.10G005400 hypothetical protein AT5G46040:AT5G46040:Major facilitator superfamily protein 1Chr10:545269–550554 (+)8.856e-12
Glyma.10G005800 hypothetical protein NA 1Chr10:589035–592833 (-)8.856e-12
Glyma.10G006200 hypothetical protein AT3G62870:AT3G62870:Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 1Chr10:613862–616294 (-)8.856e-12
Glyma.10G006300 hypothetical protein AT4G14368:AT4G14368:Regulator of chromosome condensation (RCC1) family protein 1Chr10:618040–626188 (+)8.856e-12
Glyma.10G006400 hypothetical protein NA 1Chr10:628526–629762 (+)8.856e-12