Overview Annotation GWAS Evidence Associated genes

P18123

Metabolite ID
P18123
Deionized mass
538.3314 Da
Average m/z
539.3384
Average RT
12.7029
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
10
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

10 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 3Chr03:2202325–2234931 (+)9.633e-12
Glyma.06G283900 hypothetical protein NA 2Chr06:47201931–47206514 (+)4.284e-19
Glyma.14G040700 hypothetical protein AT5G21170:AKINBETA1:5'-AMP-activated protein kinase beta-2 subunit protein 2Chr14:3050168–3054746 (-)2.184e-22
Glyma.06G283400 hypothetical protein NA 1Chr06:47132958–47137448 (+)1.181e-11
Glyma.06G283800 hypothetical protein AT2G31110:AT2G31110:trichome birefringence-like protein (DUF828)__AT2G42570:TBL39:TRICHOME BIREFRINGENCE-LIKE 39 1Chr06:47191044–47195889 (+)4.284e-19
Glyma.08G093400 hypothetical protein NA 1Chr08:7084753–7087202 (+)4.775e-11
Glyma.08G093700 hypothetical protein AT1G68080:AT1G68080:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 1Chr08:7097206–7101441 (-)4.775e-11
Glyma.11G239100 hypothetical protein NA 1Chr11:33341784–33344981 (+)1.274e-11
Glyma.15G102100 hypothetical protein AT4G14290:AT4G14290:alpha/beta-Hydrolases superfamily protein 1Chr15:7978839–7987612 (+)3.074e-12
Glyma.16G168400 hypothetical protein AT1G43700:VIP1:VIRE2-interacting protein 1 1Chr16:32835788–32840399 (+)1.274e-11