Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P18103

Metabolite ID
P18103
Deionized mass
436.1210 Da
Average m/z
437.1265
Average RT
12.6984
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.15G140700 hypothetical protein NA 5Chr15:11520847–11522863 (-)6.467e-16
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)6.911e-11
Glyma.15G140800 hypothetical protein NA 2Chr15:11525771–11533394 (+)2.823e-13
Glyma.15G141200 hypothetical protein AT3G17000:UBC32:ubiquitin-conjugating enzyme 32 2Chr15:11557041–11559982 (-)1.007e-12
Glyma.16G105100 hypothetical protein NA 2Chr16:21259552–21267517 (-)8.166e-11
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)2.155e-11
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)6.635e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)9.429e-11
Glyma.04G044600 hypothetical protein NA 1Chr04:3556928–3559705 (-)4.057e-12
Glyma.04G044800 LBD16 LBD domain-containing transcription factor NA 1Chr04:3582233–3583098 (-)4.799e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.379e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.233e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)7.838e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)7.172e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)7.498e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)6.911e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)6.911e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)6.911e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)6.911e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.616e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.616e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.616e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.616e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)4.851e-13
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.671e-12
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)1.551e-14
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)9.529e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)9.529e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)9.529e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)5.914e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)5.825e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.56e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)5.825e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)5.825e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)7.038e-12
Glyma.15G138500 hypothetical protein NA 1Chr15:11270083–11275565 (-)4.557e-11
Glyma.15G140900 hypothetical protein AT3G66658:ALDH22A1:aldehyde dehydrogenase 22A1 1Chr15:11538070–11545857 (-)2.421e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)6.414e-13
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)3.092e-12
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)5.711e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)3.168e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)2.155e-11
Glyma.18G213900 hypothetical protein AT3G08740:AT3G08740:elongation factor P (EF-P) family protein 1Chr18:50082939–50086770 (-)6.864e-11
Glyma.18G214000 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr18:50088148–50092969 (-)3.466e-11